cif_cod_check

--always-continue Continue processing and return successful return status even if errors are diagnosed.

--always-die Stop and return error status if errors are diagnosed.

--continue-on-errors Do not terminate script if errors are raised.

--die-on-errors Terminate script immediately if errors are raised (default).

--continue-on-warnings Do not terminate script if warnings are raised (default).

--die-on-warnings Terminate script immediately if warnings are raised.

--continue-on-notes Do not terminate script if notes are raised (default).

--die-on-notes Terminate script immediately if notes are raised.

--use-perl-parser Use Perl parser for CIF parsing.

--use-c-parser Use Perl & C parser for CIF parsing (default).

--cif-input Use CIF format for input (default).

--json-input Use JSON format for input.

--check-only-xyz Switch off any other checks and check ONLY xyz (the last option on the command line wins).

--no-check-xyz Switch off checks of xyz condition.

--check-authors Check if the author names comply with the COD name syntax requirements. Default.

--check-bibliography Check if the bibliographical information referring to the original source is present in the file. Default.

--require-only-doi Treat the presence of the DOI as sufficient bibliographic information.

--require-full-bibliography Require a more detailed set of bibliographic information containing items such as publication journal, year, volume, page numbers, etc. Default.

--check-chemical-formula-sum Check if the summary chemical formula complies with the chemical formula syntax requirements. This check uses a simple syntax that does not take into account things such as chemical element types, chemical element order, etc. Default.

--check-pd-block-relations Check if the relations between powder diffractogram and phase data blocks are properly described. Default.

--check-spacegroup-info

--check-operators

--check-unit-cell

--check-symmetry

--check-simultaneous-presence Check if data items from a certain data item grouping (e.g. atomic coordinates, anisotropic displacement parameters, etc.) are all simultaneously present in a data block. Missing data items are reported only if at least one data item from the grouping is already present in the data block. Default.

--check-limits

--print-limits

--add-limits--limits-file

--reset-limits

--check-adp-presence Check if each data block contains the atomic displacement parameters. The check may optionally be applied only to data files that were published after a certain year (see --max-year-adp-presence-is-optional). Default.

--check-temperature-factors Alias of the --check-adp-presence option. Deprecated.

--check-shelx-checksums Validate the checksums of embedded SHELX files. Default.

--check-embedded-file-integrity

--check-z

--check-disorder

--check-unquoted-strings Check if unquoted strings start or end with unusual characters such as ";" or "'". The presence of such features is a likely indication of an incorrectly formatted multi-line text field or a quoted string. Disabled by default.

--check-all Enable all available checks.

--check-none Disable all available checks.

--help Output a short usage message (this message) and exit.

--version Output version information and exit.

--max-year-adp-presence-is-optional Check the presence of atomic displacement parameters only in data files published after the specified year. Modifies the behaviour of --check-adp-presence. Use --no-max-year-adp-presence-is-optional to override this option. Default: 1969.

--no-max-year-adp-presence-is-optional Check the presence of atomic displacement parameters in all data files regardless of the publication year. Modifies the behaviour of --check-adp-presence.

--max-year-temperature-factors-optional Alias of the --max-year-adp-presence-is-optional option. Deprecated.

--no-max-year-temperature-factors-optional Alias of the --no-max-year-adp-presence-is-optional option. Deprecated.

Pass the output to the next command: